
<strong>Sample Headers:</strong><br>
Here are a sample headers for YARM scripts.
<menu>
<li>Header structure for YARM scripts.
	<menu>
	<li><a href="nmrparams.html">NmrParams Hash structure</a>
	<li><a href="yarmmodel.html">YarmModel Hash structure</a>
	</menu>
</menu>

<strong>Sample Scripts:</strong><br>
Here are a few useful sample YARM scripts
<menu>
<li>Model validation: analysis of a Model vs NOE data
	<menu>
	<li><a href="stats.html">Statistical analysis: entire molecule</a>
	<li><a href="stats_res.html">Statistical analysis: per residue</a>
	<li><a href="correlation.html">Correlation plot</a>
	</menu>

<li>Model refinement: using NOE data to derive a Model
	<menu>
	<li><a href="structure_refine.html">Structure refinement</a>
	<li>Correlation time refinement
	<li>Intramolecular motion (order parameter) refinement
	</menu>

<li>Simple utilities
	<menu>
	<li><a href="dist.html">Measuring distances between all protons</a>
	<li><a href="dist2.html">Measuring a specific distance</a>
	<li><a href="angle_calc.html">Measuring angles WRT principal axis</a>
	<li><a href="orderatoms.html">Ordering atoms names</a>
	</menu>

</menu>

<strong>Sample structures:</strong><br>
Here are a few PDB files that are used in the sample scripts above.
<menu>
   <li><a href="../pdb/dick_a.pdb">A-form Dickerson dodecamer PDB</a> 
   <li><a href="../pdb/dick_b.pdb">B-form Dickerson dodecamer PDB</a> 
   <li><a href="../pdb/dick_xtal.pdb">XTAL Dickerson dodecamer PDB</a> 
   <li><a href="../pdb/dick_nmr.pdb">NMR Dickerson dodecamer PDB</a> 
</menu>
<p>

