Action:
Fills in the sequence file with nucleotide parameters.
Parameters may include B-DNA parameters, Atract parameters,
bent DNA parameters, flexible site parameters etc. For more information
about the parameters go to sample scripts
The parameter sets are defined at the end of the CYCLIZE pearl script.
Example:
%seq = &fill_params( \%seq, \%BDNA );
This assigns BDNA parameters to all nucleotides in the sequence file.