References
Measurement of the DNA Bend Angle Induced by the Catabolite Activator Protein Using Monte Carlo Simulation of Cyclization Kinetics, J.D. Kahn and D.M. Crothers, J. Mol. Biol., 1998, 276, 287-309.

The Assessment of the Geometry of Dinucleotide Steps in Double-Helical DNA; a New Local Calculation Scheme, M. A. El Hassan and C. R. Calladine, J. Mol. Biol., 1995, 251, 648-684.

Protein-induced Bending and DNA Cyclization, J. D. Kahn and D. M. Crothers, Proc. Natl. Acad. Sci. USA 1992, 89, 6343-6347.

Determination of the Extent of DNA Bending by an Adenine-Thymine Tract, H.-S. Koo, J. Drak, J. A. Rice and D. M. Crothers, Biochemistry 1990, 29, 4227-4234 .

Definitions and Nomenclature of Nucleic Acid Structure Parameters, R. E. Dickerson, M. Bansul, C. R. Calladine, S. Diekmann, W. N. Hunter, O. Kennard, E. von Kitzing, R. Lavery, H. C. M. Nelson, W. K. Olson, W. Saenger, Z. Shakked, H. Sklenar, D. M. Soumpasis, C-S Tung, A. H. J. Wang, V. B. Zhurkin, EMBO J, 1989, 8, 1-4.

Topological Distributions and the Torsional Rigidity of DNA: A Monte Carlo Study of DNA Circles, S. D. Levene and D. M. Crothers, J. Mol. Biol. 1986, 189, 73-83.

Ring Closure Probabilities for DNA Fragments by Monte Carlo Simulation, S. D. Levene and D. M. Crothers, J. Mol. Biol. 1986, 189, 61-72.

A Computer Graphics Study of Sequence-Directed Bending in DNA, S. D. Levene and D. M. Crothers, J. Biomolec. Structure and Dynamics, 1983, 1, 429-436.


Jon Lapham
Yale University
Department of Chemistry - Crothers Lab